STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lqua_0667Substrate of the Dot/Icm secretion system. (258 aa)    
Predicted Functional Partners:
Lqua_0143
IcmJ protein.
    
   0.942
Lqua_1181
Hypothetical protein.
    
   0.942
icmP
IcmP protein.
    
   0.690
Lqua_0134
Protein IcmO (DotL).
    
   0.690
traD_4
Conjugative transfer protein TraD.
    
   0.667
traD_1-2
Conjugative transfer protein TraD.
    
   0.667
traG_2
Conjugal transfer protein TraG.
    
   0.667
traG_3
Conjugal transfer coupling protein TraG.
    
   0.667
caiA
acyl-CoA dehydrogenase.
       0.491
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.