Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lqua_0680 | baeB | Lqua_0680 | Lqua_2024 | Formate dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non-methylotrophic organisms. Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. FDH subfamily. | Putative glyoxalase II family protein. | 0.716 |
| Lqua_0680 | cfiA | Lqua_0680 | Lqua_0156 | Formate dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non-methylotrophic organisms. Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. FDH subfamily. | Oxaloacetate decarboxylase subunit alpha. | 0.668 |
| Lqua_0680 | gap | Lqua_0680 | Lqua_0732 | Formate dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non-methylotrophic organisms. Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. FDH subfamily. | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.688 |
| Lqua_0680 | korA | Lqua_0680 | Lqua_1812 | Formate dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non-methylotrophic organisms. Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. FDH subfamily. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.693 |
| Lqua_0680 | oxdC | Lqua_0680 | Lqua_0257 | Formate dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non-methylotrophic organisms. Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. FDH subfamily. | Oxalate decarboxylase OxdC. | 0.692 |
| Lqua_0680 | pdhB_1 | Lqua_0680 | Lqua_2834 | Formate dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non-methylotrophic organisms. Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. FDH subfamily. | 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion. | 0.748 |
| Lqua_0680 | pta_1 | Lqua_0680 | Lqua_0337 | Formate dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non-methylotrophic organisms. Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. FDH subfamily. | Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase. | 0.678 |
| Lqua_0680 | pta_2 | Lqua_0680 | Lqua_3469 | Formate dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non-methylotrophic organisms. Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. FDH subfamily. | Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase. | 0.678 |
| Lqua_0680 | pykA | Lqua_0680 | Lqua_0734 | Formate dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non-methylotrophic organisms. Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. FDH subfamily. | Pyruvate kinase II; Belongs to the pyruvate kinase family. | 0.741 |
| Lqua_0680 | ydiJ | Lqua_0680 | Lqua_0217 | Formate dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non-methylotrophic organisms. Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. FDH subfamily. | Oxidase. | 0.822 |
| baeB | Lqua_0680 | Lqua_2024 | Lqua_0680 | Putative glyoxalase II family protein. | Formate dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non-methylotrophic organisms. Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. FDH subfamily. | 0.716 |
| baeB | gap | Lqua_2024 | Lqua_0732 | Putative glyoxalase II family protein. | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.402 |
| baeB | ydiJ | Lqua_2024 | Lqua_0217 | Putative glyoxalase II family protein. | Oxidase. | 0.808 |
| cfiA | Lqua_0680 | Lqua_0156 | Lqua_0680 | Oxaloacetate decarboxylase subunit alpha. | Formate dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non-methylotrophic organisms. Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. FDH subfamily. | 0.668 |
| cfiA | korA | Lqua_0156 | Lqua_1812 | Oxaloacetate decarboxylase subunit alpha. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.843 |
| cfiA | pdhB_1 | Lqua_0156 | Lqua_2834 | Oxaloacetate decarboxylase subunit alpha. | 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion. | 0.855 |
| cfiA | pta_1 | Lqua_0156 | Lqua_0337 | Oxaloacetate decarboxylase subunit alpha. | Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase. | 0.829 |
| cfiA | pta_2 | Lqua_0156 | Lqua_3469 | Oxaloacetate decarboxylase subunit alpha. | Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase. | 0.829 |
| cfiA | pykA | Lqua_0156 | Lqua_0734 | Oxaloacetate decarboxylase subunit alpha. | Pyruvate kinase II; Belongs to the pyruvate kinase family. | 0.807 |
| cfiA | ydiJ | Lqua_0156 | Lqua_0217 | Oxaloacetate decarboxylase subunit alpha. | Oxidase. | 0.808 |
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