STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lqua_0948Hypothetical protein. (307 aa)    
Predicted Functional Partners:
Lqua_0949
Fimbrial assembly protein (PilN).
  
 0.987
lspD_1
Type II protein secretion LspD.
 
  
 0.955
pilN
Tfp pilus assembly protein PilN.
 
 0.955
Lqua_0950
Hypothetical protein.
 
     0.952
lspE_1
Type II protein secretion ATPase LspE.
 
 
 
 0.923
Lqua_0953
Hypothetical protein.
 
    0.913
Lqua_0954
Tetratricopeptide repeat protein.
 
     0.899
pilE_2
Tfp pilus assembly protein, major type IV pilin class A.
 
     0.858
Lqua_1793
Type IV pilus biogenesis protein PilO.
 
 
 0.817
pilQ
Type IV pilus (Tfp) assembly protein PilQ.
  
 
 0.817
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.