STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sufS_1Selenocysteine lyase, PLP-dependent. (391 aa)    
Predicted Functional Partners:
nifU
Nitrogen fixation protein NifU.
 
 0.996
nifU_1
NifU family transporter iron binding protein.
  
 0.995
sufB
Cysteine desulfurase.
 
 0.945
sufC
ATP transporter ATP- binding protein.
 
 
 0.944
sufD
ABC transporter permease.
 
 0.939
Lqua_0159
Endonuclease/exonuclease/phosphatase family protein.
    
   0.881
Lqua_1052
Endonuclease/Exonuclease/phosphatase family protein.
    
   0.881
moeZ_2
Putative molybdenum cofactor synthesis protein 3.
  
 
 0.823
baeB
Putative glyoxalase II family protein.
    
 0.730
iscS
Cysteine desulfurase NifS.
    
0.664
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.