STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ycgG_2Rtn protein. (532 aa)    
Predicted Functional Partners:
gmr_6
Sensory box (GGDEF/EAL domain) regulatory protein.
 0.983
ycdT
Sensor histidine kinase.
 
 0.972
gmr_5
Putative regulatory protein (GGDEF domain).
 0.970
cph2_4
Sensory box/GGDEF family protein.
 0.956
dosC
Regulatory protein (GGDEF, PAS, PAC domains).
 
 0.949
pleD_4
Diguanylate kinase.
 0.915
yeaP
GGDEF/EAL domain-containing sensory box protein.
 
 
  0.912
arcB_5
Sensory histidine-kinase / response regulator.
 
 0.905
arcB_4
Sensory histidine-kinase / response regulator.
 
 0.905
arcB_3
Sensory histidine-kinase / response regulator.
 
 0.905
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.