STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lqua_1131Protein IcmL (DotI). (189 aa)    
Predicted Functional Partners:
Lqua_0134
Protein IcmO (DotL).
 
     0.797
Lqua_0138
IcmK protein.
 
     0.796
Lqua_0144
Protein IcmB (DotO).
 
     0.796
Lqua_0129
IcmT protein.
 
     0.795
icmP
IcmP protein.
 
     0.791
dotC
Defect in organelle trafficking lipoprotein DotC.
  
     0.774
Lqua_0139
Protein IcmE (DotG).
 
   
 0.772
dotA
Defect in organelle trafficking protein DotA.
  
     0.771
enhA_2
Enhanced entry protein EnhA.
  
     0.765
enhA_3
Enhanced entry protein EnhA.
  
     0.765
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.