STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gdhBNAD-glutamate dehydrogenase. (1626 aa)    
Predicted Functional Partners:
astB
Succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2).
 
    0.897
putA
Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
  
  
 0.790
fadH
2,4-dienoyl-CoA reductase FadH1.
     
 0.761
gltB
Glutamate synthase; Belongs to the glutamate synthase family.
     
 0.746
gabD
Succinate semialdehyde dehydrogenase.
  
 
  0.743
ndoR
Xylene monooxygenase.
  
 
 0.741
korA
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
  
  0.736
Lqua_1218
Putative ErfK/YbiS/YcfS/YnhG protein.
       0.657
glnA
Glutamine synthetase.
     
 0.624
puuA
Glutamine synthetase.
     
 0.624
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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