STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lqua_1592Transglutaminase. (668 aa)    
Predicted Functional Partners:
Lqua_1591
Transmembrane protein.
 
  
 0.969
Lqua_1590
Methanol dehydrogenase regulatory protein.
 
     0.946
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
  0.786
Lqua_2851
LysM domain-containing protein.
  
     0.743
pilN
Tfp pilus assembly protein PilN.
  
     0.736
Lqua_1794
Type IV pilus biogenesis protein PilP.
  
     0.732
pilM
Tfp pilus assembly protein, ATPase PilM.
  
     0.709
Lqua_1793
Type IV pilus biogenesis protein PilO.
  
     0.709
pilZ_1
Type 4 fimbrial biogenesis protein PilZ.
  
     0.708
pilE_3
type-IV pilin.
  
     0.671
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.