Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lqua_0080 | Lqua_1594 | Lqua_0080 | Lqua_1594 | SM-20-like protein. | Cupin. | 0.474 |
| Lqua_0080 | mnmC | Lqua_0080 | Lqua_1157 | SM-20-like protein. | FAD-dependent cmnm(5)s(2)U34 oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. | 0.497 |
| Lqua_1593 | Lqua_1594 | Lqua_1593 | Lqua_1594 | Hypothetical protein. | Cupin. | 0.412 |
| Lqua_1594 | Lqua_0080 | Lqua_1594 | Lqua_0080 | Cupin. | SM-20-like protein. | 0.474 |
| Lqua_1594 | Lqua_1593 | Lqua_1594 | Lqua_1593 | Cupin. | Hypothetical protein. | 0.412 |
| Lqua_1594 | Lqua_1595 | Lqua_1594 | Lqua_1595 | Cupin. | Hypothetical protein. | 0.564 |
| Lqua_1594 | mnmC | Lqua_1594 | Lqua_1157 | Cupin. | FAD-dependent cmnm(5)s(2)U34 oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. | 0.518 |
| Lqua_1594 | rplP | Lqua_1594 | Lqua_0010 | Cupin. | 50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.942 |
| Lqua_1594 | yjgA | Lqua_1594 | Lqua_3358 | Cupin. | Alpha helix protein; Belongs to the UPF0307 family. | 0.476 |
| Lqua_1595 | Lqua_1594 | Lqua_1595 | Lqua_1594 | Hypothetical protein. | Cupin. | 0.564 |
| mnmC | Lqua_0080 | Lqua_1157 | Lqua_0080 | FAD-dependent cmnm(5)s(2)U34 oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. | SM-20-like protein. | 0.497 |
| mnmC | Lqua_1594 | Lqua_1157 | Lqua_1594 | FAD-dependent cmnm(5)s(2)U34 oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. | Cupin. | 0.518 |
| mnmC | yjgA | Lqua_1157 | Lqua_3358 | FAD-dependent cmnm(5)s(2)U34 oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. | Alpha helix protein; Belongs to the UPF0307 family. | 0.402 |
| rplP | Lqua_1594 | Lqua_0010 | Lqua_1594 | 50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | Cupin. | 0.942 |
| rplP | yjgA | Lqua_0010 | Lqua_3358 | 50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | Alpha helix protein; Belongs to the UPF0307 family. | 0.699 |
| yjgA | Lqua_1594 | Lqua_3358 | Lqua_1594 | Alpha helix protein; Belongs to the UPF0307 family. | Cupin. | 0.476 |
| yjgA | mnmC | Lqua_3358 | Lqua_1157 | Alpha helix protein; Belongs to the UPF0307 family. | FAD-dependent cmnm(5)s(2)U34 oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. | 0.402 |
| yjgA | rplP | Lqua_3358 | Lqua_0010 | Alpha helix protein; Belongs to the UPF0307 family. | 50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.699 |