STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hopD2_2Tyrosine phosphatase II superfamily transporter protein. (322 aa)    
Predicted Functional Partners:
Lqua_1869
Serine/threonine protein kinase.
   
 0.971
ankQ
Substrate of the Dot/Icm secretion system.
  
 
  0.804
yjeA
Endo-1,4-beta-xylanase-like protein.
  
 0.798
lepA
GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.
    
  0.788
Lqua_2790
Serine/threonine protein kinase.
   
 0.771
Lqua_1520
Microtubule binding protein.
  
 
   0.769
Lqua_0252
Calcium-transporting ATPase.
  
 
   0.763
traG_1
Mating contact stabilization protein TraG.
  
     0.739
Lqua_3410
Acetylpolyamine aminohydrolase.
  
 
   0.739
Lqua_1878
Hypothetical protein.
  
     0.738
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.