Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
dtpA_4Hypothetical protein. (500 aa)    
Predicted Functional Partners:
iraA
Small-molecule methyltransferase IraA.
     
 0.834
lysP
Amino acid permease.
  
     0.580
Lqua_3099
Zip family transporter.
  
 
   0.580
neuC
N-acylglucosamine 2-epimerase.
       0.463
proA_1
Zinc metalloproteinase precursor; Extracellular zinc metalloprotease.
  
   
 0.452
Lqua_1983
LPS biosynthesis protein, PseA-like protein.
     
 0.451
spsE_2
N-acetylneuraminic acid synthetase.
       0.431
gadC_2
Amino acid antiporter.
  
 
   0.428
lly
4-hydroxyphenylpyruvate dioxygenase.
     
 0.422
yveA_1
Amino acid transport protein.
  
 
   0.417
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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