STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lqua_2132Protein with a bacterial immunoglobulin-like domain protein. (477 aa)    
Predicted Functional Partners:
Lqua_2131
Hypothetical protein.
       0.773
Lqua_1277
Substrate of the Dot/Icm secretion system.
  
     0.531
pnaB
NAD(P) transhydrogenase subunit beta.
       0.522
pntA
Pyridine nucleotide transhydrogenase, alpha subunit.
       0.522
Lqua_0112
Ankyrin repeats (3 copies).
  
     0.495
pntB
NAD(P) transhydrogenase subunit beta; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family.
       0.481
Lqua_0210
Hypothetical protein.
  
     0.469
Lqua_2898
Ankyrin repeat protein.
  
     0.463
Lqua_2698
Metalloproteinase-like protein.
  
     0.446
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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