STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
bglX_1Glycosyl hydrolase. (358 aa)    
Predicted Functional Partners:
chiA
Chitinase domain protein.
     
 0.859
ybbD
Glycosyl hydrolase family protein.
     
  0.848
anmK
anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.
 
  
 0.793
amiB
N-acetylmuramoyl-L-alanine amidase.
    
 0.752
ldcA
Muramoyltetrapeptide carboxypeptidase.
  
  
 0.711
ylfB
Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.681
mltE
Membrane bound lytic murein transglycosylase D.
 
  
 0.669
mltD
Membrane bound lytic murein transglycosylase D.
 
  
 0.667
Lqua_0693
N-acetylmuramoyl-L-alanine amidase.
    
 0.648
Lqua_2138
Periplasmic protein.
       0.583
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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