STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lvrA_1Hypothetical protein. (397 aa)    
Predicted Functional Partners:
Lqua_2180
Hypothetical protein.
       0.773
Lqua_2178
Hypothetical protein.
       0.538
Lqua_2181
Hypothetical protein.
       0.477
yfcG
S-transferase; Belongs to the GST superfamily.
       0.469
traL_1
Type IV conjugative transfer system protein TraL, proteobacteria.
       0.455
traE
Type IV conjugative transfer system protein TraE.
       0.447
Lqua_2184
Conjugative transfer protein TraK.
       0.447
Lqua_2185
Conjugative transfer protein TraB.
       0.447
Lqua_2186
Conjugative transfer protein.
       0.447
traC_1
F pilus assembly protein TraC.
       0.441
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
Server load: high (94%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.