STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
traC_1F pilus assembly protein TraC. (865 aa)    
Predicted Functional Partners:
Lqua_2190
Conjugative transfer protein TraU.
 
     0.952
traW
Type-F conjugative transfer system protein.
 
     0.951
Lqua_2185
Conjugative transfer protein TraB.
 
     0.949
Lqua_2192
Conjugative transfer protein TraN.
 
     0.947
traH
TraH pilus assembly protein.
 
     0.947
Lqua_2193
Conjugal pilus assembly protein TraF.
 
     0.945
traE
Type IV conjugative transfer system protein TraE.
 
     0.943
traG_1
Mating contact stabilization protein TraG.
 
     0.942
Lqua_2194
Conjugative transfer protein.
 
     0.941
traD_1-2
Conjugative transfer protein TraD.
 
    0.890
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.