STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phhAPhenylalanine-4-hydroxylase. (272 aa)    
Predicted Functional Partners:
phs
Pterin 4 alpha carbinolamine dehydratase.
 
 0.982
hmgA
Homogentisate 1,2-dioxygenase.
 
  
 0.952
lly
4-hydroxyphenylpyruvate dioxygenase.
 
  
 0.904
hpd
4-hydroxyphenylpyruvate dioxygenase.
 
  
 0.858
maiA
Glutathione S-transferase.
 
  
 0.785
pheA
2-methylcitrate synthase.
     
 0.768
Lqua_2564
Fumarylacetoacetate hydrolase.
 
  
 0.675
sdh
Serine 3-dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
  0.562
hutH
Histidine ammonia lyase.
   
 
 0.562
pabB
Para-aminobenzoate synthase, component I.
     
 0.558
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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