STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yrdATransferase. (178 aa)    
Predicted Functional Partners:
cynT_3
Sulfate transporter.
   
 0.820
gor
Glutathione reductase.
       0.800
icfA
(beta)-carbonic anhydrase.
    
 0.797
cynT_1
Carbonic anhydrase.
    
 0.797
cynT_2
Carbonic anhydrase Mig5.
    
 0.797
Lqua_2265
Hypothetical protein.
       0.773
gloA
Lactoylglutathione lyase.
 
 
    0.725
Lqua_2266
Hemolysin D.
       0.622
ybhF_2
ABC transporter ATP-binding protein.
       0.616
ybhS
ABC transporter permease.
       0.616
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.