STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ybhF_2ABC transporter ATP-binding protein. (312 aa)    
Predicted Functional Partners:
ybhS
ABC transporter permease.
 
 0.997
ybhR
Transmembrane protein, ABC-type multidrug transport system.
 
 0.985
Lqua_2266
Hemolysin D.
  
 0.959
Lqua_2582
Lipoprotein.
 
  
 0.813
yadH
ABC transporter permease.
 
 
 0.734
atpA_2
ATP synthase F0F1 subunit alpha.
    
   0.689
atpD_2
ATP synthase F0F1 subunit beta.
    
   0.689
atpA
ATP synthase F0F1 subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.689
atpD
ATP synthase F0F1 subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
   0.689
atpG_2
Putative ATP synthase F1, gamma subunit.
    
   0.687
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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