STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
comMCompetence related protein ComM. (503 aa)    
Predicted Functional Partners:
comF
Competence protein ComF.
 
  
 0.850
smf
Protein smf.
 
 0.843
Lqua_2702
Hypothetical protein; Belongs to the UPF0102 family.
 
  
 0.752
flgF_1
Flagellar basal body rod protein FlgF.
   
   0.696
Lqua_1711
Protoporphyrinogen oxidase.
     
 0.696
comA
DNA uptake/competence protein ComA.
 
  
 0.575
Lqua_2277
Hypothetical protein.
       0.533
ruvC
Crossover junction endodeoxyribonuclease ruvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.
  
   
 0.529
yqiC
Membrane fusogenic activity.
       0.517
cmdD_1
Peptide synthetase, non-ribosomal.
  
  
  0.462
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.