STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ydhC_2Drug resistance transporter, Bcr/CflA. (393 aa)    
Predicted Functional Partners:
Lqua_2347
Multidrug resistance efflux pump.
 
    0.888
iucC
Siderophore biosynthetic enzyme FrgA.
 
     0.831
Lqua_3279
Acetyltransferase.
   
 
 0.683
Lqua_2345
Coiled-coil protein.
 
     0.660
Lqua_3431
Saframycin Mx1 synthetase B.
  
 
 0.607
yycG
Sensory box histidine kinase/response regulator.
 
   
 0.487
emrB
Multidrug efflux system protein; Belongs to the major facilitator superfamily.
  
   
 0.486
pheA
2-methylcitrate synthase.
   
 
 0.479
cseB
Two-component response regulator.
 
     0.404
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.