STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lqua_2364Succinylglutamate desuccinylase / aspartoacylase family protein. (346 aa)    
Predicted Functional Partners:
rimK
Glutathione synthase, ribosomal protein S6 modification protein; Belongs to the RimK family.
 
     0.793
pepP
Xaa-Pro aminopeptidase.
    
 0.781
putA
Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
    
  0.742
bioA
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
 0.741
Lqua_3186
AIG2-like family protein.
    
 0.648
ldcA
Muramoyltetrapeptide carboxypeptidase.
    
  0.579
Lqua_0794
Secreted protein.
 
     0.555
Lqua_0520
Chloromuconate cycloisomerase.
    
  0.551
ykfB
Chloromuconate cycloisomerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
    
  0.551
qorA
Quinone oxidoreductase.
       0.465
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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