STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oprBCarbohydrate-selective porin, OprB family. (442 aa)    
Predicted Functional Partners:
traI_4
Putative conjugative transfer protein TraI.
  
     0.765
Lqua_3340
Serine/threonine protein kinase.
  
     0.765
Lqua_0412
Streptomycin 3''-adenylyltransferase; Multifunctional nucleotidyltransferase/glutamate rich protein GrpB/ribosomal protein alanine acetyltransferase.
  
     0.764
Lqua_0485
D12 class N6 adenine-specific DNA methyltransferase.
  
     0.764
aacA-aphD_2
Aminoglycoside 6'-N-acetyltransferase.
  
     0.763
Lqua_0406
Putative secreted esterase.
  
     0.762
Lqua_0198
Serine/threonine protein kinase.
  
     0.758
noc
Nucleoid occlusion protein; Belongs to the ParB family.
  
     0.753
Lqua_0459
Initiator Replication protein.
  
     0.751
Lqua_0431
Putative sex pilus assembly and mating pair protein TraG.
  
     0.746
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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