STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lqua_2457Conjugal transfer protein TrbH. (135 aa)    
Predicted Functional Partners:
trbD_1
Conjugal transfer protein trbD.
    
  0.840
trbC
Conjugal transfer protein TrbC.
    
  0.840
trbG_1
Conjugal transfer protein TrbG.
    
  0.833
trbF_1
Conjugal transfer protein trbF.
    
  0.833
trbE_1
Conjugal transfer protein TrbE.
    
  0.828
virB
LvhB11.
    
  0.825
trbJ_1
Conjugal transfer protein TrbJ.
    
  0.821
trbI_2
Conjugal transfer protein TrbI.
       0.788
trbL_1
Conjugal transfer protein trbL.
    
  0.774
traC_2
DNA primase traC.
       0.714
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.