STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trbD_1Conjugal transfer protein trbD. (99 aa)    
Predicted Functional Partners:
trbF_1
Conjugal transfer protein trbF.
 
  
 0.969
trbJ_1
Conjugal transfer protein TrbJ.
 
  
 0.968
trbG_1
Conjugal transfer protein TrbG.
 
  
 0.967
trbI_2
Conjugal transfer protein TrbI.
 
  
  0.966
trbE_1
Conjugal transfer protein TrbE.
 
  
 0.966
virB
LvhB11.
 
  
 0.958
trbL_1
Conjugal transfer protein trbL.
 
  
 0.953
traF_1
Conjugal transfer protein TraF.
 
     0.933
traC_2
DNA primase traC.
 
     0.932
traG_2
Conjugal transfer protein TraG.
 
     0.931
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.