STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gmhAPhosphoheptose isomerase. (224 aa)    
Predicted Functional Partners:
gmhB
D,D-heptose 1,7-bisphosphate phosphatase.
 
 0.995
hisB
Imidazole glycerol-phosphate dehydratase/histidinol phosphatase; In the N-terminal section; belongs to the histidinol- phosphatase family.
  
 
 0.954
dnaA
Chromosome replication initiator DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
    
 
 0.874
Lqua_2704
Conserved exported protein of unknown function containing BON domain protein.
  
    0.860
Lqua_2705
Hemolysin, lipoprotein.
  
    0.847
rfaQ
Glycosyltransferase.
 
  
 0.845
Lqua_2702
Hypothetical protein; Belongs to the UPF0102 family.
  
  
 0.834
Lqua_2706
GDSL-like Lipase/Acylhydrolase.
       0.773
dltB_5
Putative alginate O-acetyltransferase AlgI; Belongs to the membrane-bound acyltransferase family.
       0.773
lppC
Lipoprotein.
  
    0.734
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.