STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lqua_2829Putative RNA helicase. (1131 aa)    
Predicted Functional Partners:
oatA_2
O-acetyltransferase.
   
    0.714
oatA_1
Acyltransferase.
   
    0.714
lepB_3
Effector protein B, substrate of the Dot/Icm secretion system.
 
     0.512
Lqua_1737
Hypothetical protein.
  
     0.472
Lqua_0993
Hypothetical protein.
 
     0.458
Lqua_2828
Hypothetical protein.
       0.436
iraA
Small-molecule methyltransferase IraA.
  
     0.415
Lqua_2079
Hypothetical protein.
  
     0.403
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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