STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lqua_2851LysM domain-containing protein. (345 aa)    
Predicted Functional Partners:
pilQ
Type IV pilus (Tfp) assembly protein PilQ.
  
 
 
 0.986
pilN
Tfp pilus assembly protein PilN.
  
 
   0.926
Lqua_1793
Type IV pilus biogenesis protein PilO.
  
 
   0.926
Lqua_1794
Type IV pilus biogenesis protein PilP.
  
 
   0.926
pilM
Tfp pilus assembly protein, ATPase PilM.
  
 
   0.925
smf
Protein smf.
       0.800
Lqua_2853
Hypothetical protein.
       0.800
pilZ_1
Type 4 fimbrial biogenesis protein PilZ.
  
    0.777
pilC_2
Pilus assembly protein PilC.
  
 
   0.771
fimV
FimV protein.
  
     0.761
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.