STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lqua_2860LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (287 aa)    
Predicted Functional Partners:
gltC
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.687
oxyR_2
LysR transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.638
cmpR
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.619
trmL
RNA methyltransferase TrmH family, group 2; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.
 
     0.619
speB_1
Formiminoglutamase; Belongs to the arginase family.
 
     0.602
traI_4
Putative conjugative transfer protein TraI.
  
     0.595
dmlR_1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.585
dmlR_2
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.573
Lqua_0412
Streptomycin 3''-adenylyltransferase; Multifunctional nucleotidyltransferase/glutamate rich protein GrpB/ribosomal protein alanine acetyltransferase.
  
     0.563
Lqua_0406
Putative secreted esterase.
  
     0.553
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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