STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tfdBFAD monooxygenase, PheA/TfdB family. (525 aa)    
Predicted Functional Partners:
cmdD_2
Peptide synthetase, non-ribosomal.
 
 0.858
arnA
Peptide synthetase, non-ribosomal.
  
 
 0.815
hmp
Oxidoreductase, FAD-binding protein.
  
  
 0.810
Lqua_3022
Hypothetical protein.
       0.798
ndoR
Xylene monooxygenase.
  
  
 0.766
cmdD_1
Peptide synthetase, non-ribosomal.
  
 
 0.723
Lqua_1139
Oxidoreductase.
  
     0.690
Lqua_3431
Saframycin Mx1 synthetase B.
  
 
 0.685
ispB_1
Octaprenyl-diphosphate synthase.
    
 0.683
ubiG
3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
    
  0.625
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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