STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lqua_3058Hypothetical protein. (105 aa)    
Predicted Functional Partners:
Lqua_3057
Hypothetical protein.
  
    0.803
Lqua_3056
Hypothetical protein.
       0.800
lspJ
Type II secretory pathway protein LspJ.
  
 0.779
lspK
Type II secretory pathway protein.
   
 
 0.702
lspE_1
Type II protein secretion ATPase LspE.
   
  0.614
pilB
Pilus assembly protein PilB.
   
  0.614
lspE_2
Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
   
  0.614
aaeB
P-hydroxybenzoic acid efflux pump subunit AaeB.
       0.589
emrA_1
Hemolysin D.
       0.588
comA
DNA uptake/competence protein ComA.
   
  
 0.505
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.