STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lqua_3069Aspartyl protease. (166 aa)    
Predicted Functional Partners:
yabJ
Endoribonuclease L-PSP.
       0.800
spoT
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
       0.800
uup_3
ABC transporter ATP-binding protein.
       0.589
pilN
Tfp pilus assembly protein PilN.
  
     0.487
Lqua_2705
Hemolysin, lipoprotein.
  
     0.456
Lqua_1794
Type IV pilus biogenesis protein PilP.
  
     0.430
pcnB_2
Poly(A) polymerase I.
  
     0.428
Lqua_1793
Type IV pilus biogenesis protein PilO.
  
     0.405
pilE_3
type-IV pilin.
  
     0.400
Lqua_3067
Hypothetical protein.
       0.400
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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