STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hipA_3HipA protein, DNA binding regulator. (417 aa)    
Predicted Functional Partners:
Lqua_0844
Transcriptional regulator.
 
 
 0.949
Lqua_3181
Helix-turn-helix protein.
   
   0.927
hipA_3-2
HipA protein.
 
 
   0.925
Lqua_0324
Regulatory protein munI (modular protein).
   
   0.690
Lqua_1091
Anaerobic benzoate catabolism transcriptional regulator.
   
   0.690
ydcN
DNA-binding transcriptional regulator.
  
   0.668
Lqua_2466
Phage repressor.
  
   0.668
Lqua_2946
Hypothetical protein.
  
   0.668
Lqua_2433
Putative DNA-binding transcriptional regulator.
 
     0.556
Lqua_3183
Hypothetical protein.
       0.486
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.