STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
citB_2Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain protein. (275 aa)    
Predicted Functional Partners:
Lqua_3204
Hypothetical protein.
       0.562
arcB_5
Sensory histidine-kinase / response regulator.
     
 0.541
arcB_4
Sensory histidine-kinase / response regulator.
     
 0.541
arcB_3
Sensory histidine-kinase / response regulator.
     
 0.541
arcB_6
Sensory box histidine kinase/response regulator.
     
 0.541
gacS/letS
Transmission sensor LetS.
     
 0.505
psuG
Indigoidine synthase A-like protein involved in pigment biosynthesis; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family.
    
  0.418
Lqua_0866
Hypothetical protein.
    
 0.407
uvrY
Response regulator GacA.
    
 0.407
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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