STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
artJ_2-2Amino acid ABC transporter substrate-binding protein. (244 aa)    
Predicted Functional Partners:
artQ
Amino acid (glutamine) ABC transporter permease.
 
 0.863
arcB_5
Sensory histidine-kinase / response regulator.
   
 0.829
arcB_4
Sensory histidine-kinase / response regulator.
   
 0.829
arcB_3
Sensory histidine-kinase / response regulator.
   
 0.829
arcB_6
Sensory box histidine kinase/response regulator.
   
 0.829
pheA
2-methylcitrate synthase.
     
 0.794
gmr_7
Regulatory protein (GGDEF domain).
    
 0.779
artM
ABC transporter ATP-binding protein.
 
 0.775
nifL
Sensory box (GGDEF/EAL domain) regulatory protein.
   
 0.771
gacS/letS
Transmission sensor LetS.
   
 0.743
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.