STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tcmN_1Hydroxyneurosporene (C20) methyltransferase. (366 aa)    
Predicted Functional Partners:
Lqua_3431
Saframycin Mx1 synthetase B.
 
  
 0.873
Lqua_1788
Cytochrome P450.
  
 
 0.863
cmdD_2
Peptide synthetase, non-ribosomal.
   
 0.854
arnA
Peptide synthetase, non-ribosomal.
 
  
 0.816
pksN
Polyketide synthase.
 
  
 0.797
ispB_1
Octaprenyl-diphosphate synthase.
    
 0.781
tcmN_3
O-methyltransferase.
  
     0.750
Lqua_3279
Acetyltransferase.
    
 0.728
lgrB
Non-ribosomal peptide synthetase/polyketide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
 
  
 0.658
cmdD_1
Peptide synthetase, non-ribosomal.
   
 0.634
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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