STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
baiFacyl-CoA transferase; Belongs to the CoA-transferase III family. (350 aa)    
Predicted Functional Partners:
pta_1
Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase.
    
 0.834
pta_2
Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase.
    
 0.834
yfcX
Enoyl CoA hydratase; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
    
 0.831
fadB
3-hydroxyacyl CoA dehydrogenase oxidoreductase protein; Belongs to the enoyl-CoA hydratase/isomerase family.
    
 0.831
Lqua_2833
Glutaryl CoA dehydrogenase.
 
 0.760
mdlC
Benzoylformate decarboxylase.
 
 
 0.756
ribF
Riboflavin biosynthesis protein RibF (riboflavin kinase/FMN adenylyltransferase); Belongs to the ribF family.
   
 
  0.696
sdhB_1
Succinate dehydrogenase iron-sulfur subunit.
     
 0.694
echA8_3
3-hydroxyisobutyryl-CoA hydrolase.
 
  
 0.692
budB
Acetolactate synthase; Belongs to the TPP enzyme family.
  
 
 0.677
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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