STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lqua_34242,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase. (235 aa)    
Predicted Functional Partners:
Lqua_0252
Calcium-transporting ATPase.
  
  
  0.794
ankQ
Substrate of the Dot/Icm secretion system.
  
 
   0.794
AnkY
Rolling pebbles isoform 7.
  
 
   0.786
ylfB
Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
     0.781
Lqua_1878
Hypothetical protein.
 
     0.780
Lqua_1520
Microtubule binding protein.
  
     0.774
Lqua_3410
Acetylpolyamine aminohydrolase.
  
     0.774
Lqua_3427
GH3 auxin-responsive promoter.
 
     0.774
gntT
H gluconate symporter.
  
     0.773
Lqua_2918
Hypothetical protein.
  
     0.772
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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