STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acpPAcyl carrier protein. (75 aa)    
Predicted Functional Partners:
cmdD_2
Peptide synthetase, non-ribosomal.
  
 0.998
Lqua_3431
Saframycin Mx1 synthetase B.
  
 0.998
lgrB
Non-ribosomal peptide synthetase/polyketide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.987
pksN
Polyketide synthase.
  
 0.986
srfAA
Non-ribosomal peptide synthase.
  
 0.978
arnA
Peptide synthetase, non-ribosomal.
  
 0.978
lgrD_1
Non-ribosomal peptide synthetase/polyketide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.969
cmdD_1
Peptide synthetase, non-ribosomal.
  
 0.913
nuoC
NADH dehydrogenase I chain C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.
   
  0.906
rplU
50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
   
   0.894
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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