STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lqua_3499Hypothetical protein. (126 aa)    
Predicted Functional Partners:
ylfB
Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
  0.977
Lqua_3501
Hypothetical protein.
 
  0.877
rtxA-2
Structural toxin protein RtxA.
  
  
  0.814
Lqua_3498
Hypothetical protein.
 
  
 
0.810
Lqua_3102
Hypothetical protein.
  
 
  0.807
Lqua_3500
Hypothetical protein.
 
    
0.776
ctpA_1
Carboxy-terminal protease; Belongs to the peptidase S41A family.
   
  0.760
Lqua_2640
Hypothetical protein.
  
 
  0.752
Lqua_2259
Hypothetical protein.
   
 0.733
ftsK
Cell division protein FtsK.
    
   0.689
Your Current Organism:
Legionella quateirensis
NCBI taxonomy Id: 45072
Other names: ATCC 49507, CCUG 44899, CIP 105271, L. quateirensis, NCTC 12376
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.