Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lqui_0527 | Lqui_0528 | Lqui_0527 | Lqui_0528 | NAD-glutamate dehydrogenase. | Putative ErfK/YbiS/YcfS/YnhG protein. | 0.597 |
Lqui_0527 | gabD | Lqui_0527 | Lqui_0529 | NAD-glutamate dehydrogenase. | Succinate semialdehyde dehydrogenase. | 0.687 |
Lqui_0528 | Lqui_0527 | Lqui_0528 | Lqui_0527 | Putative ErfK/YbiS/YcfS/YnhG protein. | NAD-glutamate dehydrogenase. | 0.597 |
Lqui_0528 | Lqui_0532 | Lqui_0528 | Lqui_0532 | Putative ErfK/YbiS/YcfS/YnhG protein. | Hypothetical protein. | 0.414 |
Lqui_0528 | enhB_2 | Lqui_0528 | Lqui_0531 | Putative ErfK/YbiS/YcfS/YnhG protein. | Enhanced entry protein EnhB. | 0.414 |
Lqui_0528 | gabD | Lqui_0528 | Lqui_0529 | Putative ErfK/YbiS/YcfS/YnhG protein. | Succinate semialdehyde dehydrogenase. | 0.804 |
Lqui_0528 | lidK | Lqui_0528 | Lqui_0530 | Putative ErfK/YbiS/YcfS/YnhG protein. | Phosphatidylcholine synthase; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.497 |
Lqui_0532 | Lqui_0528 | Lqui_0532 | Lqui_0528 | Hypothetical protein. | Putative ErfK/YbiS/YcfS/YnhG protein. | 0.414 |
Lqui_0532 | enhB_2 | Lqui_0532 | Lqui_0531 | Hypothetical protein. | Enhanced entry protein EnhB. | 0.804 |
Lqui_0532 | gabD | Lqui_0532 | Lqui_0529 | Hypothetical protein. | Succinate semialdehyde dehydrogenase. | 0.404 |
Lqui_0532 | lidK | Lqui_0532 | Lqui_0530 | Hypothetical protein. | Phosphatidylcholine synthase; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.634 |
enhB_2 | Lqui_0528 | Lqui_0531 | Lqui_0528 | Enhanced entry protein EnhB. | Putative ErfK/YbiS/YcfS/YnhG protein. | 0.414 |
enhB_2 | Lqui_0532 | Lqui_0531 | Lqui_0532 | Enhanced entry protein EnhB. | Hypothetical protein. | 0.804 |
enhB_2 | gabD | Lqui_0531 | Lqui_0529 | Enhanced entry protein EnhB. | Succinate semialdehyde dehydrogenase. | 0.408 |
enhB_2 | lidK | Lqui_0531 | Lqui_0530 | Enhanced entry protein EnhB. | Phosphatidylcholine synthase; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.634 |
gabD | Lqui_0527 | Lqui_0529 | Lqui_0527 | Succinate semialdehyde dehydrogenase. | NAD-glutamate dehydrogenase. | 0.687 |
gabD | Lqui_0528 | Lqui_0529 | Lqui_0528 | Succinate semialdehyde dehydrogenase. | Putative ErfK/YbiS/YcfS/YnhG protein. | 0.804 |
gabD | Lqui_0532 | Lqui_0529 | Lqui_0532 | Succinate semialdehyde dehydrogenase. | Hypothetical protein. | 0.404 |
gabD | enhB_2 | Lqui_0529 | Lqui_0531 | Succinate semialdehyde dehydrogenase. | Enhanced entry protein EnhB. | 0.408 |
gabD | lidK | Lqui_0529 | Lqui_0530 | Succinate semialdehyde dehydrogenase. | Phosphatidylcholine synthase; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.485 |
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