STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lqui_1469Capsule biosynthesis protein. (351 aa)    
Predicted Functional Partners:
cphA_1
Cyanophycin synthetase.
    
  0.716
cphA_2
Cyanophycin synthetase.
    
  0.716
Lqui_1470
Hypothetical protein.
       0.615
Lqui_1471
Arginine ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
       0.615
Lqui_1784
Putative Glutathione synthetase ATP-binding domain-like protein.
  
  
  0.570
murF
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alani ne ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
    
  0.553
murE
UDP-N-acetylmuramoylalanyl-D-glutamate-2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.
 
  
  0.514
Lqui_1939
Putative Methyltransferase.
  
     0.510
Lqui_0593
Cytokinin oxidase.
  
     0.491
wecA
alpha-N-acetylglucosaminyltransferase.
  
  
  0.468
Your Current Organism:
Legionella quinlivanii
NCBI taxonomy Id: 45073
Other names: ATCC 43830, CCUG 31234 A, CIP 105272, DSM 21216, L. quinlivanii, Legionella quinlivanni, NCTC 12433
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.