STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fadD-1Long chain fatty acid-CoA ligase. (554 aa)    
Predicted Functional Partners:
Lqui_2518
Non-ribosomal peptide synthetase/polyketide synthetase.
 
 0.995
Lqui_2544
Peptide synthetase, non-ribosomal.
 
0.992
Lqui_1807
Non-ribosomal peptide synthetase/polyketide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
0.989
Lqui_1805
Peptide synthase.
  
 0.988
Lqui_2547
Non-ribosomal peptide synthase.
 
0.986
pksJ
Polyketide synthase, type I.
 
 0.964
yfcX
Enoyl CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.912
Lqui_1318
2-acylglycerophosphoethanolamine acyltransferase.
 
     0.904
fadB
3-hydroxyacyl CoA dehydrogenase oxidoreductase protein; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.894
rplF
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.889
Your Current Organism:
Legionella quinlivanii
NCBI taxonomy Id: 45073
Other names: ATCC 43830, CCUG 31234 A, CIP 105272, DSM 21216, L. quinlivanii, Legionella quinlivanni, NCTC 12433
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