Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lqui_0123 | Lqui_0324 | Lqui_0123 | Lqui_0324 | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase. | D-Ala-D-Ala carboxypeptidase. | 0.635 |
Lqui_0123 | enhA_5 | Lqui_0123 | Lqui_2620 | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase. | Enhanced entry protein EnhA. | 0.499 |
Lqui_0324 | Lqui_0123 | Lqui_0324 | Lqui_0123 | D-Ala-D-Ala carboxypeptidase. | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase. | 0.635 |
Lqui_0324 | enhA_5 | Lqui_0324 | Lqui_2620 | D-Ala-D-Ala carboxypeptidase. | Enhanced entry protein EnhA. | 0.499 |
enhA_5 | Lqui_0123 | Lqui_2620 | Lqui_0123 | Enhanced entry protein EnhA. | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase. | 0.499 |
enhA_5 | Lqui_0324 | Lqui_2620 | Lqui_0324 | Enhanced entry protein EnhA. | D-Ala-D-Ala carboxypeptidase. | 0.499 |
enhA_5 | kbl | Lqui_2620 | Lqui_2617 | Enhanced entry protein EnhA. | 2-amino-3-ketobutyrate CoA ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. | 0.480 |
enhA_5 | mrdA | Lqui_2620 | Lqui_0359 | Enhanced entry protein EnhA. | Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.499 |
enhA_5 | tdh | Lqui_2620 | Lqui_2618 | Enhanced entry protein EnhA. | Threonine(-3-)dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family. | 0.653 |
enhA_5 | yjjK | Lqui_2620 | Lqui_2619 | Enhanced entry protein EnhA. | Putative fused transporter subunits of ABC superfamily: ATP-binding component. | 0.717 |
kbl | enhA_5 | Lqui_2617 | Lqui_2620 | 2-amino-3-ketobutyrate CoA ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. | Enhanced entry protein EnhA. | 0.480 |
kbl | tdh | Lqui_2617 | Lqui_2618 | 2-amino-3-ketobutyrate CoA ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. | Threonine(-3-)dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family. | 0.981 |
kbl | yjjK | Lqui_2617 | Lqui_2619 | 2-amino-3-ketobutyrate CoA ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. | Putative fused transporter subunits of ABC superfamily: ATP-binding component. | 0.521 |
mrdA | enhA_5 | Lqui_0359 | Lqui_2620 | Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | Enhanced entry protein EnhA. | 0.499 |
tdh | enhA_5 | Lqui_2618 | Lqui_2620 | Threonine(-3-)dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family. | Enhanced entry protein EnhA. | 0.653 |
tdh | kbl | Lqui_2618 | Lqui_2617 | Threonine(-3-)dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family. | 2-amino-3-ketobutyrate CoA ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. | 0.981 |
tdh | yjjK | Lqui_2618 | Lqui_2619 | Threonine(-3-)dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family. | Putative fused transporter subunits of ABC superfamily: ATP-binding component. | 0.726 |
yjjK | enhA_5 | Lqui_2619 | Lqui_2620 | Putative fused transporter subunits of ABC superfamily: ATP-binding component. | Enhanced entry protein EnhA. | 0.717 |
yjjK | kbl | Lqui_2619 | Lqui_2617 | Putative fused transporter subunits of ABC superfamily: ATP-binding component. | 2-amino-3-ketobutyrate CoA ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. | 0.521 |
yjjK | tdh | Lqui_2619 | Lqui_2618 | Putative fused transporter subunits of ABC superfamily: ATP-binding component. | Threonine(-3-)dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family. | 0.726 |