Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lqui_1249 | Lqui_2724 | Lqui_1249 | Lqui_2724 | Putative membrane-associated phospholipid phosphatase. | V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family. | 0.750 |
Lqui_2721 | Lqui_2723 | Lqui_2721 | Lqui_2723 | Poly(3-hydroxybutyrate) depolymerase. | V-type ATP synthase subunit D. | 0.776 |
Lqui_2721 | Lqui_2724 | Lqui_2721 | Lqui_2724 | Poly(3-hydroxybutyrate) depolymerase. | V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family. | 0.776 |
Lqui_2721 | Lqui_2725 | Lqui_2721 | Lqui_2725 | Poly(3-hydroxybutyrate) depolymerase. | V-type ATP synthase subunit K. | 0.769 |
Lqui_2721 | Lqui_2726 | Lqui_2721 | Lqui_2726 | Poly(3-hydroxybutyrate) depolymerase. | V-type ATP synthase subunit E. | 0.766 |
Lqui_2721 | Lqui_2727 | Lqui_2721 | Lqui_2727 | Poly(3-hydroxybutyrate) depolymerase. | V-type ATP synthase subunit A. | 0.766 |
Lqui_2721 | Lqui_2729 | Lqui_2721 | Lqui_2729 | Poly(3-hydroxybutyrate) depolymerase. | Peptide chain release factor. | 0.736 |
Lqui_2721 | atpA_2 | Lqui_2721 | Lqui_2728 | Poly(3-hydroxybutyrate) depolymerase. | V-type ATPase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family. | 0.760 |
Lqui_2721 | atpB | Lqui_2721 | Lqui_2722 | Poly(3-hydroxybutyrate) depolymerase. | V-type ATPase subunit B. | 0.779 |
Lqui_2723 | Lqui_2721 | Lqui_2723 | Lqui_2721 | V-type ATP synthase subunit D. | Poly(3-hydroxybutyrate) depolymerase. | 0.776 |
Lqui_2723 | Lqui_2724 | Lqui_2723 | Lqui_2724 | V-type ATP synthase subunit D. | V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family. | 0.999 |
Lqui_2723 | Lqui_2725 | Lqui_2723 | Lqui_2725 | V-type ATP synthase subunit D. | V-type ATP synthase subunit K. | 0.999 |
Lqui_2723 | Lqui_2726 | Lqui_2723 | Lqui_2726 | V-type ATP synthase subunit D. | V-type ATP synthase subunit E. | 0.999 |
Lqui_2723 | Lqui_2727 | Lqui_2723 | Lqui_2727 | V-type ATP synthase subunit D. | V-type ATP synthase subunit A. | 0.951 |
Lqui_2723 | Lqui_2729 | Lqui_2723 | Lqui_2729 | V-type ATP synthase subunit D. | Peptide chain release factor. | 0.762 |
Lqui_2723 | atpA_2 | Lqui_2723 | Lqui_2728 | V-type ATP synthase subunit D. | V-type ATPase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family. | 0.999 |
Lqui_2723 | atpB | Lqui_2723 | Lqui_2722 | V-type ATP synthase subunit D. | V-type ATPase subunit B. | 0.999 |
Lqui_2723 | atpE | Lqui_2723 | Lqui_0846 | V-type ATP synthase subunit D. | ATP synthase F0F1 subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.997 |
Lqui_2724 | Lqui_1249 | Lqui_2724 | Lqui_1249 | V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family. | Putative membrane-associated phospholipid phosphatase. | 0.750 |
Lqui_2724 | Lqui_2721 | Lqui_2724 | Lqui_2721 | V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family. | Poly(3-hydroxybutyrate) depolymerase. | 0.776 |
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