STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lqui_2790Short chain dehydrogenase. (199 aa)    
Predicted Functional Partners:
Lqui_2518
Non-ribosomal peptide synthetase/polyketide synthetase.
  
 0.966
Lqui_2544
Peptide synthetase, non-ribosomal.
  
 0.870
Lqui_1807
Non-ribosomal peptide synthetase/polyketide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.844
Lqui_2547
Non-ribosomal peptide synthase.
 
 0.840
Lqui_1805
Peptide synthase.
  
 0.816
pta
Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase.
  
 0.799
Lqui_2167
Abi-like protein.
   
  0.787
Lqui_2183
Glutamate synthase.
     
 0.766
lmxF_3
Multidrug efflux pump.
       0.753
fadB
3-hydroxyacyl CoA dehydrogenase oxidoreductase protein; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.732
Your Current Organism:
Legionella quinlivanii
NCBI taxonomy Id: 45073
Other names: ATCC 43830, CCUG 31234 A, CIP 105272, DSM 21216, L. quinlivanii, Legionella quinlivanni, NCTC 12433
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