Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lqui_2078 | Lqui_2794 | Lqui_2078 | Lqui_2794 | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | Oligopeptide transporter. | 0.414 |
Lqui_2078 | atpB-2 | Lqui_2078 | Lqui_0845 | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | ATP synthase F0 subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | 0.518 |
Lqui_2792 | Lqui_2793 | Lqui_2792 | Lqui_2793 | Hypothetical protein. | Alanine racemase. | 0.661 |
Lqui_2792 | Lqui_2794 | Lqui_2792 | Lqui_2794 | Hypothetical protein. | Oligopeptide transporter. | 0.647 |
Lqui_2792 | hutI | Lqui_2792 | Lqui_2796 | Hypothetical protein. | Imidazolone-5-propionate hydrolase. | 0.643 |
Lqui_2792 | yjeA | Lqui_2792 | Lqui_2795 | Hypothetical protein. | Endo-1,4-beta-xylanase-like protein. | 0.647 |
Lqui_2792 | yueD | Lqui_2792 | Lqui_2797 | Hypothetical protein. | Sepiapterin reductase. | 0.643 |
Lqui_2793 | Lqui_2792 | Lqui_2793 | Lqui_2792 | Alanine racemase. | Hypothetical protein. | 0.661 |
Lqui_2793 | Lqui_2794 | Lqui_2793 | Lqui_2794 | Alanine racemase. | Oligopeptide transporter. | 0.757 |
Lqui_2793 | hutI | Lqui_2793 | Lqui_2796 | Alanine racemase. | Imidazolone-5-propionate hydrolase. | 0.751 |
Lqui_2793 | yjeA | Lqui_2793 | Lqui_2795 | Alanine racemase. | Endo-1,4-beta-xylanase-like protein. | 0.757 |
Lqui_2793 | yueD | Lqui_2793 | Lqui_2797 | Alanine racemase. | Sepiapterin reductase. | 0.751 |
Lqui_2794 | Lqui_2078 | Lqui_2794 | Lqui_2078 | Oligopeptide transporter. | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | 0.414 |
Lqui_2794 | Lqui_2792 | Lqui_2794 | Lqui_2792 | Oligopeptide transporter. | Hypothetical protein. | 0.647 |
Lqui_2794 | Lqui_2793 | Lqui_2794 | Lqui_2793 | Oligopeptide transporter. | Alanine racemase. | 0.757 |
Lqui_2794 | atpB-2 | Lqui_2794 | Lqui_0845 | Oligopeptide transporter. | ATP synthase F0 subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | 0.480 |
Lqui_2794 | hutI | Lqui_2794 | Lqui_2796 | Oligopeptide transporter. | Imidazolone-5-propionate hydrolase. | 0.799 |
Lqui_2794 | yjeA | Lqui_2794 | Lqui_2795 | Oligopeptide transporter. | Endo-1,4-beta-xylanase-like protein. | 0.804 |
Lqui_2794 | yueD | Lqui_2794 | Lqui_2797 | Oligopeptide transporter. | Sepiapterin reductase. | 0.768 |
atpB-2 | Lqui_2078 | Lqui_0845 | Lqui_2078 | ATP synthase F0 subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | 0.518 |
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