STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lsan_0236enoyl-CoA hydratase. (348 aa)    
Predicted Functional Partners:
Lsan_1768
3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family.
 
 0.990
stuC
Sensor histidine kinase.
    
 0.960
acdA
Acyl CoA dehydrogenase.
 
 0.954
Lsan_0904
Sensory histidine-kinase / response regulator.
    
 0.954
Lsan_3987
Sensory box histidine kinase/response regulator.
    
 0.954
letS
Legionella transmission sensor LetS.
    
 0.952
paaF
enoyl-CoA hydratase.
 
 
 
0.943
Lsan_1052
acyl-CoA synthetase.
  
 0.935
Lsan_2556
Non-ribosomal peptide synthetase/polyketide synthetase.
 
 0.886
rkpA
Type I polyketide synthase WcbR.
  
 0.883
Your Current Organism:
Legionella santicrucis
NCBI taxonomy Id: 45074
Other names: ATCC 35301, CCUG 29673, CIP 103849, DSM 23075, JCM 7557, L. santicrucis, Legionella sancticrucis, Legionella santacruxensis, NCTC 11989, strain SC-63-C7
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