STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lsan_0257GNAT family acetyltransferase. (175 aa)    
Predicted Functional Partners:
grpB_1
Glutamate rich protein GrpB.
 
    0.916
Lsan_0256
Transcriptional regulator.
       0.773
aph_1
Spectinomycin phosphotransferase.
  
     0.770
aph_3
Spectinomycin phosphotransferase.
  
     0.769
aph_2
Spectinomycin phosphotransferase.
  
     0.768
Lsan_3117
GNAT family acetyltransferase.
  
     0.751
Lsan_2907
Phosphotransferase enzyme family protein.
  
     0.744
aacA4_3
Aminoglycoside N (6')-acetyltransferase.
  
     0.731
Lsan_2912
Aminoglycoside 6'-N-acetyltransferase.
  
    0.728
aacA4_1
Aminoglycoside N(6')acetyltransferase.
  
     0.727
Your Current Organism:
Legionella santicrucis
NCBI taxonomy Id: 45074
Other names: ATCC 35301, CCUG 29673, CIP 103849, DSM 23075, JCM 7557, L. santicrucis, Legionella sancticrucis, Legionella santacruxensis, NCTC 11989, strain SC-63-C7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.