Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lsan_0279 | Lsan_1052 | Lsan_0279 | Lsan_1052 | Coiled-coil-containing protein. | acyl-CoA synthetase. | 0.969 |
Lsan_0279 | Lsan_1114 | Lsan_0279 | Lsan_1114 | Coiled-coil-containing protein. | acyl-CoA synthetase. | 0.878 |
Lsan_0279 | dnaK | Lsan_0279 | Lsan_0889 | Coiled-coil-containing protein. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.961 |
Lsan_0279 | grpE | Lsan_0279 | Lsan_0888 | Coiled-coil-containing protein. | Heat-shock protein GrpE(HSP-70 cofactor); Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Sever [...] | 0.782 |
Lsan_0279 | htpG | Lsan_0279 | Lsan_3285 | Coiled-coil-containing protein. | Class III heat-shock protein HtpG(molecular chaperone); Molecular chaperone. Has ATPase activity. | 0.867 |
Lsan_0279 | ppiB | Lsan_0279 | Lsan_0461 | Coiled-coil-containing protein. | Peptidyl-prolyl cis-trans isomerase B (cyclophilin-type PPIase family); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.778 |
Lsan_0279 | rplM | Lsan_0279 | Lsan_0474 | Coiled-coil-containing protein. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.771 |
Lsan_0279 | rplO | Lsan_0279 | Lsan_1737 | Coiled-coil-containing protein. | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.775 |
Lsan_0279 | rplQ | Lsan_0279 | Lsan_1731 | Coiled-coil-containing protein. | 50S ribosomal protein L17. | 0.778 |
Lsan_0279 | sodB | Lsan_0279 | Lsan_3935 | Coiled-coil-containing protein. | Superoxide dismutase, iron; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.773 |
Lsan_1052 | Lsan_0279 | Lsan_1052 | Lsan_0279 | acyl-CoA synthetase. | Coiled-coil-containing protein. | 0.969 |
Lsan_1052 | Lsan_1114 | Lsan_1052 | Lsan_1114 | acyl-CoA synthetase. | acyl-CoA synthetase. | 0.999 |
Lsan_1052 | dnaK | Lsan_1052 | Lsan_0889 | acyl-CoA synthetase. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.626 |
Lsan_1052 | htpG | Lsan_1052 | Lsan_3285 | acyl-CoA synthetase. | Class III heat-shock protein HtpG(molecular chaperone); Molecular chaperone. Has ATPase activity. | 0.613 |
Lsan_1052 | ppiB | Lsan_1052 | Lsan_0461 | acyl-CoA synthetase. | Peptidyl-prolyl cis-trans isomerase B (cyclophilin-type PPIase family); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.999 |
Lsan_1052 | rplM | Lsan_1052 | Lsan_0474 | acyl-CoA synthetase. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.995 |
Lsan_1052 | rplO | Lsan_1052 | Lsan_1737 | acyl-CoA synthetase. | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.989 |
Lsan_1052 | rplQ | Lsan_1052 | Lsan_1731 | acyl-CoA synthetase. | 50S ribosomal protein L17. | 0.989 |
Lsan_1052 | sodB | Lsan_1052 | Lsan_3935 | acyl-CoA synthetase. | Superoxide dismutase, iron; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.844 |
Lsan_1114 | Lsan_0279 | Lsan_1114 | Lsan_0279 | acyl-CoA synthetase. | Coiled-coil-containing protein. | 0.878 |
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