STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lsan_0679Hypothetical protein. (403 aa)    
Predicted Functional Partners:
stuC
Sensor histidine kinase.
 
 0.975
Lsan_0678
Hypothetical protein.
     0.967
Lsan_0677
Regulatory protein (GGDEF domain).
 
 
 0.964
Lsan_0904
Sensory histidine-kinase / response regulator.
 
 0.888
Lsan_3987
Sensory box histidine kinase/response regulator.
 
 0.887
Lsan_1238
LuxR family transcriptional regulator.
 
 0.878
Lsan_1173
Regulatory protein (GGDEF and EAL domains).
 
 
 0.844
letS
Legionella transmission sensor LetS.
 
 0.833
Lsan_0680
FIST N domain protein.
 
     0.814
Lsan_1214
Sensory box histidine kinase/response regulator.
   
 0.806
Your Current Organism:
Legionella santicrucis
NCBI taxonomy Id: 45074
Other names: ATCC 35301, CCUG 29673, CIP 103849, DSM 23075, JCM 7557, L. santicrucis, Legionella sancticrucis, Legionella santacruxensis, NCTC 11989, strain SC-63-C7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.